70 research outputs found
Quarkonium dissociation by anisotropy
We compute the screening length for quarkonium mesons moving through an
anisotropic, strongly coupled N=4 super Yang-Mills plasma by means of its
gravity dual. We present the results for arbitrary velocities and orientations
of the mesons, as well as for arbitrary values of the anisotropy. The
anisotropic screening length can be larger or smaller than the isotropic one,
and this depends on whether the comparison is made at equal temperatures or at
equal entropy densities. For generic motion we find that: (i) mesons dissociate
above a certain critical value of the anisotropy, even at zero temperature;
(ii) there is a limiting velocity for mesons in the plasma, even at zero
temperature; (iii) in the ultra-relativistic limit the screening length scales
as with \epsilon =1/2, in contrast with the isotropic result
\epsilon =1/4.Comment: 39 pages, 26 figures; v2: minor changes, added reference
Energy loss in a strongly coupled anisotropic plasma
We study the energy loss of a rotating infinitely massive quark moving, at
constant velocity, through an anisotropic strongly-coupled N=4 plasma from
holography. It is shown that, similar to the isotropic plasma, the energy loss
of the rotating quark is due to either the drag force or radiation with a
continuous crossover from drag-dominated regime to the radiation dominated
regime. We find that the anisotropy has a significant effect on the energy loss
of the heavy quark, specially in the crossover regime. We argue that the energy
loss due to radiation in anisotropic media is less than the isotropic case.
Interestingly this is similar to analogous calculations for the energy loss in
weakly coupled anisotropic plasma.Comment: 26+1 pages, 10 figures, typos fixe
IFNL4 ss469415590 polymorphism is associated with unfavourable clinical and immunological status in HIV-infected individuals
AbstractThe IFNL4 ss469415590 polymorphism, in high linkage disequilibrium with the IL28B rs12979860 variant, has been associated with hepatitis C virus clearance. We evaluated whether ss469415590 is associated with clinical and immunovirological parameters in human immunodeficiency virus-infected subjects. We found an independent association of the IFNL4 ss469415590 polymorphism with higher prevalence of AIDS-defining illnesses and lower CD4 T cell numbers. These results suggest the existence of common host defence mechanisms against different viral infections
Persistent HIV-controllers are more prone to spontaneously clear HCV: a retrospective cohort study.
HIV-controllers have the ability to spontaneously maintain viraemia at low or undetectable levels in the absence of antiretroviral treatment. Furthermore, HIV-controllers seem to have a superior capacity to spontaneously clear hepatitis C virus (HCV) compared to non HIV-controllers. Some of these subjects eventually lose HIV-controller status (transient controllers), whereas some HIV-controllers show a persistent natural HIV control (persistent controllers). We aimed to analyse whether persistent controllers have superior capacity to spontaneously clear HCV compared to transient controllers.
We recruited HIV-controllers from January 1981 up to October 2016 with available antibodies to HCV (anti-HCV) data (n = 744). Factors associated with HIV spontaneous control in relation to HCV status were analysed in persistent and transient HIV-controllers with anti-HCV positive (n = 202 and n = 138 respectively) in comparison with 1700 HCV positive non HIV-controllers recruited from January 1981 up to March 2018, bivariate and multivariate analyses, following a logistic regression model, were applied. In addition, the factors related to the loss and time to lose HIV-controller status were explored (n = 744) using Log rank test and Kaplan-Meier curves, in this case the multivariate analysis consisted in a Cox regression model.
A higher frequency of HCV spontaneous clearance was found in persistent HIV-controllers (25.5%) compared to non-controllers (10.2%). After adjusting for potential confounders, as sex, age, HIV transmission risk, CD4+ T-cell nadir and time of follow-up, HCV clearance was independently associated with persistent HIV spontaneous control (p = 0.002; OR (95% CI) = 2.573 (1.428 to 4.633)), but not with transient spontaneous control (p = 0.119; 1.589 (0.888 to 2.845)). Furthermore, persistent HIV-controllers were more likely to spontaneously clear the HCV in comparison with transient controllers (p = 0.027; 0.377 (0.159 to 0.893). Finally, not to lose or lengthen the time of losing this control was independently associated with HCV spontaneous clearance (p = 0.010; 0.503 (0.297 to 0.850).
This study shows an association between spontaneous persistent HIV-control and HCV spontaneous clearance. The study findings support the idea of preserved immune mechanisms in persistent HIV control implicated in HCV spontaneous clearance. These results highlight persistent HIV-controllers but not transient controllers as a good model of functional HIV cure.This work was supported by the Instituto de Salud Carlos III (research contracts CPII014/00025 to E.R.‐M., and FI14/00431 to L.T.‐D. and research projects PI12/02283, PI16/00684, PI19/01127 to E.R.‐M.) and Red Temática de Investigación Cooperativa en SIDA (Projects RD12/0017/0029, RD12/0017/0031, and RD16/0025/0020 and RD16/0025/0013), which is included in the Acción Estratégica en Salud, Plan Nacional de Investigación Científica, Desarrollo e Innovación Tecnológica 2008 to 2011 and 2013 to 2016, Instituto de Salud Carlos III, Fondos FEDER. E.R.‐M. was supported by Consejería de Salud y Bienestar Social of Junta de Andalucía through the Nicolás Monardes program (C‐0032/17), N Rallón is a Miguel Servet investigator from the Spanish Carlos III Institute of Health (ISCIII), grant CP14/00198, Madrid, Spain and B.D.M. received a grant from The Spanish Ministry of Education (FPU13/02451). Work in CL‐G’s laboratory was supported by grants SAF (2010 to 17226) and (2016‐77894‐R) from MINECO (Spain) and FIS (PI 13/02269, ISCIII) and in part by the RIS‐RETIC grants RD06/006/0036 and RD12/0017/0028 funded by the ISC III‐FEDER. MP has a contract of RIS‐RETIC RD12/0017/0036.S
Early-Time Energy Loss in a Strongly-Coupled SYM Plasma
We carry out an analytic study of the early-time motion of a quark in a
strongly-coupled maximally-supersymmetric Yang-Mills plasma, using the AdS/CFT
correspondence. Our approach extracts the first thermal effects as a small
perturbation of the known quark dynamics in vacuum, using a double expansion
that is valid for early times and for (moderately) ultrarelativistic quark
velocities. The quark is found to lose energy at a rate that differs
significantly from the previously derived stationary/late-time result: it
scales like T^4 instead of T^2, and is associated with a friction coefficient
that is not independent of the quark momentum. Under conditions representative
of the quark-gluon plasma as obtained at RHIC, the early energy loss rate is a
few times smaller than its late-time counterpart. Our analysis additionally
leads to thermally-corrected expressions for the intrinsic energy and momentum
of the quark, in which the previously discovered limiting velocity of the quark
is found to appear naturally.Comment: 39 pages, no figures. v2: Minor corrections and clarifications.
References added. Version to be published in JHE
On the Beaming of Gluonic Fields at Strong Coupling
We examine the conditions for beaming of the gluonic field sourced by a heavy
quark in strongly-coupled conformal field theories, using the AdS/CFT
correspondence. Previous works have found that, contrary to naive expectations,
it is possible to set up collimated beams of gluonic radiation despite the
strong coupling. We show that, on the gravity side of the correspondence, this
follows directly (for arbitrary quark motion, and independently of any
approximations) from the fact that the string dual to the quark remains
unexpectedly close to the AdS boundary whenever the quark moves
ultra-relativistically. We also work out the validity conditions for a related
approximation scheme that proposed to explain the beaming effect though the
formation of shock waves in the bulk fields emitted by the string. We find that
these conditions are fulfilled in the case of ultra-relativistic uniform
circular motion that motivated the proposal, but unfortunately do not hold for
much more general quark trajectories.Comment: 1+33 pages, 2 figure
Anti-TRBC1 antibody-based flow cytometric detection of T-cell clonality: standardization of sample preparation and diagnostic implementation
Simple Summary The anti-TRBC1 antibody JOVI-1 has recently been identified as a flow cytometry marker potentially useful for assessment of T-cell clonality. The aim of this study was to optimize a flow cytometric method for routine use of anti-TRBC1 to assess T-cell clonality and validate it in a large series of normal and pathological samples. Our results showed that the best resolution to accurately identify TRBC1(+) cells was achieved by adding the CD3 antibody either simultaneously or after TRBC1. In addition, TRBC1(+)/TRBC1(-) ratios within different T alpha beta-cell subsets are provided as expected reference ranges for polyclonal T-cells. Based on the optimized approach here proposed, we detected monoclonal T alpha beta-cell populations with high specificity (96%) and a high analytical sensitivity/level of detection (<= 10(-4)), when clonal T-cells exhibited immunophenotypic aberrancies. These findings further support and extend previous observations about the utility of TRBC1 for the diagnostic screening and monitoring of clonal T alpha beta-cell populations.A single antibody (anti-TRBC1; JOVI-1 antibody clone) against one of the two mutually exclusive T-cell receptor beta-chain constant domains was identified as a potentially useful flow-cytometry (FCM) marker to assess T alpha beta-cell clonality. We optimized the TRBC1-FCM approach for detecting clonal T alpha beta-cells and validated the method in 211 normal, reactive and pathological samples. TRBC1 labeling significantly improved in the presence of CD3. Purified TRBC1(+) and TRBC1(-) monoclonal and polyclonal T alpha beta-cells rearranged TRBJ1 in 44/47 (94%) and TRBJ1+TRBJ2 in 48 of 48 (100%) populations, respectively, which confirmed the high specificity of this assay. Additionally, TRBC1(+)/TRBC1(-) ratios within different T alpha beta-cell subsets are provided as reference for polyclonal cells, among which a bimodal pattern of TRBC1-expression profile was found for all TCRV beta families, whereas highly-variable TRBC1(+)/TRBC1(-) ratios were observed in more mature vs. naive T alpha beta-cell subsets (vs. total T-cells). In 112/117 (96%) samples containing clonal T alpha beta-cells in which the approach was validated, monotypic expression of TRBC1 was confirmed. Dilutional experiments showed a level of detection for detecting clonal T alpha beta-cells of <= 10(-4) in seven out of eight pathological samples. These results support implementation of the optimized TRBC1-FCM approach as a fast, specific and accurate method for assessing T-cell clonality in diagnostic-FCM panels, and for minimal (residual) disease detection in mature T alpha beta(+) leukemia/lymphoma patients.Stemcel biology/Regenerative medicine (incl. bloodtransfusion
Class-modeling analysis reveals T-cell homeostasis disturbances involved in loss of immune control in elite controllers
Despite long-lasting HIV replication control, a significant proportion of elite controller (EC) patients may experience CD4 T-cell loss. Discovering perturbations in immunological parameters could help our understanding of the mechanisms that may be operating in those patients experiencing loss of immunological control.
Methods A case–control study was performed to evaluate if alterations in different T-cell homeostatic parameters can predict CD4 T-cell loss in ECs by comparing data from EC patients showing significant CD4 decline (cases) and EC patients showing stable CD4 counts (controls). The partial least-squares–class modeling (PLS-CM) statistical methodology was employed to discriminate between the two groups of patients, and as a predictive model.
Results
Herein, we show that among T-cell homeostatic alterations, lower levels of naïve and recent thymic emigrant subsets of CD8 cells and higher levels of effector and senescent subsets of CD8 cells as well as higher levels of exhaustion of CD4 cells, measured prior to CD4 T-cell loss, predict the loss of immunological control.
Conclusions
These data indicate that the parameters of T-cell homeostasis may identify those EC patients with a higher proclivity to CD4 T-cell loss. Our results may open new avenues for understanding the mechanisms underlying immunological progression despite HIV replication control, and eventually, for finding a functional cure through immune-based clinical trials.projects RD12/0017/0031, RD16/0025/
0013, and SAF2015-66193-R as part of the Health Research and Development
Strategy, State Plan for Scientific and Technical Research and Innovation (2008–
2011 and 2013–2016) and cofinanced by the Institute of Health Carlos III (ISCIII),
Sub-Directorate General for Research Assessment and Promotion and European
Regional Development Fund. NR is a Miguel Servet investigator from the ISCIII
(CP14/00198), Madrid, Spain. C Restrepo was funded by project RD12/0017/
0031 and is currently funded by project RD16/0025/0013. M García is a
predoctoral student co-funded by grant CP14/00198 and an Intramural
Research Scholarship from Instituto de Investigación Sanitaria-Fundación Jiménez
Díaz (IIS-FJD)
Computational Approaches to Explainable Artificial Intelligence:Advances in Theory, Applications and Trends
Deep Learning (DL), a groundbreaking branch of Machine Learning (ML), has emerged as a driving force in both theoretical and applied Artificial Intelligence (AI). DL algorithms, rooted in complex and non-linear artificial neural systems, excel at extracting high-level features from data. DL has demonstrated human-level performance in real-world tasks, including clinical diagnostics, and has unlocked solutions to previously intractable problems in virtual agent design, robotics, genomics, neuroimaging, computer vision, and industrial automation. In this paper, the most relevant advances from the last few years in Artificial Intelligence (AI) and several applications to neuroscience, neuroimaging, computer vision, and robotics are presented, reviewed and discussed. In this way, we summarize the state-of-the-art in AI methods, models and applications within a collection of works presented at the 9 International Conference on the Interplay between Natural and Artificial Computation (IWINAC). The works presented in this paper are excellent examples of new scientific discoveries made in laboratories that have successfully transitioned to real-life applications
- …